Effects of nonlinear models with interactions of discrete and continuous variables: Estimating, graphing, and interpreting

I want to estimate, graph, and interpret the effects of nonlinear models with interactions of continuous and discrete variables. The results I am after are not trivial, but obtaining what I want using margins, marginsplot, and factor-variable notation is straightforward. Read more…

Flexible discrete choice modeling using a multinomial probit model, part 2


In the first part of this post, I discussed the multinomial probit model from a random utility model perspective. In this part, we will have a closer look at how to interpret our estimation results.

How do we interpret our estimation results?

We created a fictitious dataset of individuals who were presented a set of three health insurance plans (Sickmaster, Allgood, and Cowboy Health). We pretended to have a random sample of 20- to 60-year-old persons who were asked Read more…

Flexible discrete choice modeling using a multinomial probit model, part 1

\(\newcommand{\xb}{{\bf x}}
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\newcommand{\gammab}{\boldsymbol{\gamma}}\)We have no choice but to choose

We make choices every day, and often these choices are made among a finite number of potential alternatives. For example, do we take the car or ride a bike to get to work? Will we have dinner at home or eat out, and if we eat out, where do we go? Scientists, marketing analysts, or political consultants, to name a few, wish to find out why people choose what they choose.

In this post, Read more…

Unit-root tests in Stata

\newcommand{\betab}{\boldsymbol{\beta}}\)Determining the stationarity of a time series is a key step before embarking on any analysis. The statistical properties of most estimators in time series rely on the data being (weakly) stationary. Loosely speaking, a weakly stationary process is characterized by a time-invariant mean, variance, and autocovariance.

In most observed series, however, the presence of a trend component results in the series being nonstationary. Furthermore, the trend can be either deterministic or stochastic, depending on which appropriate transformations must be applied to obtain a stationary series. For example, a stochastic trend, or commonly known as a unit root, is eliminated by differencing the series. However, differencing a series that in fact contains a deterministic trend results in a unit root in the moving-average process. Similarly, subtracting a deterministic trend from a series that in fact contains a stochastic trend does not render a stationary series. Hence, it is important to identify whether nonstationarity is due to a deterministic or a stochastic trend before applying the proper transformations.

In this post, Read more…

Multiple equation models: Estimation and marginal effects using mlexp

We continue with the series of posts where we illustrate how to obtain correct standard errors and marginal effects for models with multiple steps. In this post, we estimate the marginal effects and standard errors for a hurdle model with two hurdles and a lognormal outcome using mlexp. mlexp allows us to estimate parameters for multiequation models using maximum likelihood. In the last post (Multiple equation models: Estimation and marginal effects using gsem), we used gsem to estimate marginal effects and standard errors for a hurdle model with two hurdles and an exponential mean outcome.

We exploit the fact that the hurdle-model likelihood is separable and the joint log likelihood is the sum of the individual hurdle and outcome log likelihoods. We estimate the parameters of each hurdle and the outcome separately to get initial values. Then, we use mlexp to estimate the parameters of the model and margins to obtain marginal effects. Read more…

Multiple equation models: Estimation and marginal effects using gsem

Starting point: A hurdle model with multiple hurdles

In a sequence of posts, we are going to illustrate how to obtain correct standard errors and marginal effects for models with multiple steps.

Our inspiration for this post is an old Statalist inquiry about how to obtain marginal effects for a hurdle model with more than one hurdle (http://www.statalist.org/forums/forum/general-stata-discussion/general/1337504-estimating-marginal-effect-for-triple-hurdle-model). Hurdle models have the appealing property that their likelihood is separable. Each hurdle has its own likelihood and regressors. You can estimate each one of these hurdles separately to obtain point estimates. However, you cannot get standard errors or marginal effects this way.

In this post, Read more…

Tests of forecast accuracy and forecast encompassing

\newcommand{\betab}{\boldsymbol{\beta}}\)Applied time-series researchers often want to compare the accuracy of a pair of competing forecasts. A popular statistic for forecast comparison is the mean squared forecast error (MSFE), a smaller value of which implies a better forecast. However, a formal test, such as Diebold and Mariano (1995), distinguishes whether the superiority of one forecast is statistically significant or is simply due to sampling variability.

A related test is the forecast encompassing test. This test is used to determine whether one of the forecasts encompasses all the relevant information from the other. The resulting test statistic may lead a researcher to either combine the two forecasts or drop the forecast that contains no additional information.

In this post, Read more…

Gelman–Rubin convergence diagnostic using multiple chains


MCMC algorithms used for simulating posterior distributions are indispensable tools in Bayesian analysis. A major consideration in MCMC simulations is that of convergence. Has the simulated Markov chain fully explored the target posterior distribution so far, or do we need longer simulations? A common approach in assessing MCMC convergence is based on running and analyzing the difference between multiple chains.

For a given Bayesian model, bayesmh is capable of producing multiple Markov chains with randomly dispersed initial values by using the initrandom option, available as of the update on 19 May 2016. In this post, I demonstrate the Gelman–Rubin diagnostic as a more formal test for convergence using multiple chains. For graphical diagnostics, see Graphical diagnostics using multiple chains in [BAYES] bayesmh for more details. To compute the Gelman–Rubin diagnostic, I use an unofficial command, grubin, which can be installed by typing the following in Stata: Read more…

Understanding omitted confounders, endogeneity, omitted variable bias, and related concepts

Initial thoughts

Estimating causal relationships from data is one of the fundamental endeavors of researchers. Ideally, we could conduct a controlled experiment to estimate causal relations. However, conducting a controlled experiment may be infeasible. For example, education researchers cannot randomize education attainment and they must learn from observational data.

In the absence of experimental data, we construct models to capture the relevant features of the causal relationship we have an interest in, using observational data. Models are successful if the features we did not include can be ignored without affecting our ability to ascertain the causal relationship we are interested in. Sometimes, however, ignoring some features of reality results in models that yield relationships that cannot be interpreted causally. In a regression framework, depending on our discipline or our research question, we give a different name to this phenomenon: endogeneity, omitted confounders, omitted variable bias, simultaneity bias, selection bias, etc.

Below I show how we can understand many of these problems in a unified regression framework and use simulated data to illustrate how they affect estimation and inference. Read more…

Programming an estimation command in Stata: Consolidating your code

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\)I write ado-commands that estimate the parameters of an exponential conditional mean (ECM) model and a probit conditional mean (PCM) model by nonlinear least squares, using the methods that I discussed in the post Programming an estimation command in Stata: Nonlinear least-squares estimators. These commands will either share lots of code or repeat lots of code, because they are so similar. It is almost always better to share code than to repeat code. Shared code only needs to be changed in one place to add a feature or to fix a problem; repeated code must be changed everywhere. I introduce Mata libraries to share Mata functions across ado-commands, and I introduce wrapper commands to share ado-code.

This is the 27th post in the series Programming an estimation command in Stata. I recommend that you start at the beginning. See Programming an estimation command in Stata: A map to posted entries for a map to all the posts in this series.

Ado-commands for ECM and PCM models

I now convert the examples of Read more…